dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00077
Location and strand information: 6526 - 7890 (+)
Family: 2.A.22.5.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00078
Location and strand information: 7896 - 8801 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00079
Location and strand information: 8888 - 10294 (-)
Family: null
Protein type: null
Protein description: Alkaline phosphatase 4

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00080
Location and strand information: 10438 - 11442 (-)
Family: GH43|GH43_12
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 6.5807
Protein molecular weight: 37622.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00081
Location and strand information: 11740 - 12171 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00082
Location and strand information: 12258 - 16376 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00083
Location and strand information: 16990 - 20142 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00084
Location and strand information: 20158 - 21876 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00085
Location and strand information: 21893 - 23311 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00086
Location and strand information: 23339 - 25663 (+)
Family: GH10|CBM22
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.264
Protein molecular weight: 86011.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00087
Location and strand information: 25852 - 27564 (+)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3291
Protein molecular weight: 64779.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00088
Location and strand information: 27634 - 29277 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00089
Location and strand information: 29316 - 30737 (+)
Family: 2.A.2.3.2
Protein type: TC
Protein description: Glucuronide carrier protein

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00090
Location and strand information: 30843 - 31973 (+)
Family: GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 5.6133
Protein molecular weight: 42424.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00091
Location and strand information: 32014 - 32985 (+)
Family: GH43_1|GH43
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.7361
Protein molecular weight: 36510.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00092
Location and strand information: 33009 - 35132 (+)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 6.654
Protein molecular weight: 80326.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00093
Location and strand information: 35178 - 36353 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_3|CGC1
Gene ID: MGYG000004823_00094
Location and strand information: 36660 - 38993 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0676
Protein molecular weight: 88450.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004823_00077	hypothetical protein	TC	6526	7890	+	2.A.22.5.3
MGYG000004823_00078	hypothetical protein	null	7896	8801	+	HHH_3\| HHH_3\| HHH_3
MGYG000004823_00079	Alkaline phosphatase 4	null	8888	10294	-	Alk_phosphatase
MGYG000004823_00080	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	10438	11442	-	GH43\| GH43_12
MGYG000004823_00081	hypothetical protein	null	11740	12171	-	Glyco_hydro_43
MGYG000004823_00082	Sensor histidine kinase RcsC	TF	12258	16376	-	HTH_AraC+HTH_AraC
MGYG000004823_00083	TonB-dependent receptor SusC	TC	16990	20142	+	1.B.14.6.1
MGYG000004823_00084	SusD-like protein	null	20158	21876	+	SusD-like_3\| SusD_RagB
MGYG000004823_00085	hypothetical protein	null	21893	23311	+	SGBP_B_XBD
MGYG000004823_00086	hypothetical protein	CAZyme	23339	25663	+	GH10\| CBM22
MGYG000004823_00087	hypothetical protein	CAZyme	25852	27564	+	GH35
MGYG000004823_00088	hypothetical protein	null	27634	29277	+	SASA\| Glyco_hydro_2_N\| SASA
MGYG000004823_00089	Glucuronide carrier protein	TC	29316	30737	+	2.A.2.3.2
MGYG000004823_00090	Endo-1,4-beta-xylanase A	CAZyme	30843	31973	+	GH10
MGYG000004823_00091	Xylosidase/arabinosidase	CAZyme	32014	32985	+	GH43_1\| GH43
MGYG000004823_00092	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	33009	35132	+	GH67
MGYG000004823_00093	hypothetical protein	null	35178	36353	-	Amidase_3
MGYG000004823_00094	hypothetical protein	CAZyme	36660	38993	+	GH115
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004823_00080	GH43_e124
MGYG000004823_00086	GH10_e47\|3.2.1.8	xylan
MGYG000004823_00087
MGYG000004823_00090	GH10_e55\|3.2.1.8\|3.2.1.55	xylan
MGYG000004823_00091	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000004823_00092	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan
MGYG000004823_00094	GH115_e1\|3.2.1.-	arabinogalactan